Corem

Corem 412

Condition Blocks

  • All
  • limited - carbon source
  • DNA damage
  • hypoxia
  • oxidative stress

Genes

NameCommon NameLinksDescriptionStartStopStrandChromosome

Enriched in 388 Conditions

Name
H37Rv..Dubos.media.replicate.2
H37Rv..Dubos.media.replicate.3
H37Rv..7H9.roll.replicate.1.y
Strain.1843..replicate.1
Strain.1843...replicate.2
Strain.1843..replicate.4
Strain.9800608...replicate.3
Strain.M3061a..replicate.4
H37Rv.Vs.M.bovis.rep4
MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.x
MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6.x
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.2
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.4
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.4
MTB.strain.1254.Ctrl.vs.high.aeration.rep1
MTB.strain.1254.Ctrl.vs.high.aeration.rep2
MTB.strain.1254.Ctrl.vs.high.aeration.rep3
MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2
CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.2
CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.4
MTB1254.Day.0.rep.1
MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1
H37Rv.vs..H37Rv.SDS.treated.rep.3
H37Rv.vs..H37Rv.SDS.treated.rep.6
High.iron.wt.vs.low.iron.wt.3a
MTB1254.vs..MTB1254.rep1
H37Rv.hypoxia.2hr.rep.1
H37Rv.hypoxia.2hr.rep.2
H37Rv.hypoxia.2hr.rep.3
H37Rv.hypoxia.2hr.rep.4
H37Rv.hypoxia.2hr.rep.5
H37Rv.hypoxia.2hr.rep.6
H37Rv.Day.0.rep.3
H37Rv.Day8.2
H37Rv.Day8.3
H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5
H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.6
NRP.Day6..2
NRP.Day10..2
NRP.Day12..2
NRP.Day14..4
NRP.Day20..2
pH4.8vspH6.8..7h.
pH5.6vspH6.8..2h.
X0.1mM.GSNOvsDMSO..6h.
X0.1mM.GSNOvsDMSO..6h.A
X0.2ug.mL.Mtmvsctrl..1.5h..x
X0.2ug.mL.Mtmvsctrl..2h.B.x
X0.2ug.mL.Mtmvsctrl..4h..x
X0.2ug.mL.Mtm.ctrl..4h...1.x
X0.2ug.mL.Mtm.ctrl..4h...2.x
Mtm.0.2ug.mL.vs.ctrl.8h.1.x
X4mM.H2O2vsctrl..2h.
X4mM.H2O2vsctrl..4h.
X4mM.H2O2vsctrl..4h.A
H2O2.4mM.vs.ctrl.8h.1
X20mJ.UVvsctrl..6h.
UV.40J.vs.ctrl.8h.1
UV.60J.vs.ctrl.6h.1
H37Rv.hypoxia.4hr.rep.1
H37Rv.hypoxia.4hr.rep.2
H37Rv.hypoxia.4hr.rep.3
H37Rv.hypoxia.4hr.rep.5
H37Rv.hypoxia.4hr.rep.7
H37Rv.hypoxia.8hr.rep.1
H37Rv.hypoxia.8hr.rep.3
H37Rv.hypoxia.12hr.rep.1
H37Rv.hypoxia.12hr.rep.2
H37Rv.hypoxia.12hr.rep.3
H37Rv.hypoxia.1.day.rep.2
H37Rv.hypoxia.1.day.rep.3
H37Rv.hypoxia.1.day.rep.4
H37Rv.hypoxia.1.day.rep.5
H37Rv.hypoxia.1.day.rep.6
H37Rv.hypoxia.1.day.rep.7
H37Rv.hypoxia.1.day.rep.10
H37Rv.hypoxia.4.day.rep.1
H37Rv.hypoxia.4.day.rep.4
H37Rv.hypoxia.4.day.rep.5
H37Rv.hypoxia.4.day.rep.6
H37Rv.hypoxia.4.day.rep.7
H37Rv.hypoxia.7.day.rep.1
H37Rv.hypoxia.7.day.rep.2
H37Rv.hypoxia.7.day.rep.3
H37Rv.hypoxia.7.day.rep.5
H37Rv.hypoxia.7.day.rep.6
H37Rv.hypoxia.7.day.rep.7
H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
H37Rv.wild.type.Vs.H37Rv.wild.type.rep.1
H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2
H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5
H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6
H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.1
H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.3
H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6
X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.x
X20ug.ml.KCN.vs.DMSO.6hrs.x
AA_30uM_1h_01
AA_30uM_1h_07
AA_30uM_1h_08
AA_30uM_2h_02
AA_30uM_2h_04
AA_30uM_2h_09
AA_30uM_30min_02
AA_30uM_30min_05
AA_30uM_30min_06
AA_30uM_4h_03
AA_30uM_4h_05
AA_60uM_24h_01
AA_60uM_24h_02
Acetate.3mM.10m.01
Acetate.3mM.10m.02
Acetate.3mM.10m.03
Acetate.3mM.10m.06
Acetate.3mM.10m.07
Acetate.3mM.2h.03
Acetate.3mM.2h.06
Acetate.3mM.30m.03
Acetate.3mM.30m.04
Acetate.3mM.30m.06
Acetate.3mM.30m.08
Acetate.3mM.60m.01
Acetate.3mM.60m.02
Glucose_5mM_10min_01
Glycerol_1._30M_01
L2A_30uM_1h_01
L2A_30uM_1h_02
L2A_30uM_2h_03
L2A_30uM_30min_01
L2A_30uM_30min_03
L2A_30uM_4h_03
MTB1254_SDS_90MIN_01
OA_50uM_10min_04
OA_50uM_1h_02
OA_50uM_24h_03
OA_50uM_2h_02
OA_50uM_4h_02
PA_50uM_12h_06
PA_50uM_1h_01
PA_50uM_1h_12
PA_50uM_24h_01
PA_50uM_24h_10
PA_50uM_30.min_06
PA_50uM_30.min_07
PA_50uM_30min_11
PA_50uM_3d_04
Starvation_1254_PA50_6h_02
Starvation_OA50_24h_02
H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.1
H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3
H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1
H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.2
H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3
CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.3
CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1
CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3
CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.1
Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
H37Rv.reaeration.for.1hrs.rep.1
H37Rv.reaeration.for.1hrs.rep.2
H37Rv.reaeration.for.1hrs.rep.3
H37Rv.reaeration.for.1hrs.rep.4
H37Rv.reaeration.for.1hrs.rep.5
H37Rv.reaeration.for.1hrs.rep.6
H37Rv.reaeration.for.1hrs.rep.8
H37Rv.reaeration.for.4hrs.rep.1
H37Rv.reaeration.for.4hrs.rep.2
H37Rv.reaeration.for.4hrs.rep.3
H37Rv.reaeration.for.4hrs.rep.4
H37Rv.reaeration.for.4hrs.rep.5
H37Rv.reaeration.for.4hrs.rep.6
H37Rv.reaeration.for.4hrs.rep.7
H37Rv.reaeration.for.4hrs.rep.8
H37Rv.reaeration.for.6hrs.rep.1
H37Rv.reaeration.for.6hrs.rep.2
H37Rv.reaeration.for.6hrs.rep.3
H37Rv.reaeration.for.6hrs.rep.4
H37Rv.reaeration.for.6hrs.rep.5
H37Rv.reaeration.for.12hrs.rep.1
H37Rv.reaeration.for.12hrs.rep.2
H37Rv.reaeration.for.12hrs.rep.3
H37Rv.reaeration.for.12hrs.rep.4
H37Rv.reaeration.for.12hrs.rep.5
H37Rv.reaeration.for.12hrs.rep.6
H37Rv.reaeration.for.24hrs.rep.1
H37Rv.reaeration.for.24hrs.rep.2
H37Rv.reaeration.for.24hrs.rep.3
H37Rv.reaeration.for.24hrs.rep.4
H37Rv.reaeration.for.24hrs.rep.5
H37Rv.reaeration.for.24hrs.rep.6
Mtb.Erdman.strain.2000.ppm.CO.rep.2
MTB.in.Wild.type.macrophages.for.4hrs
MTB.in.Wild.type.macrophages...IFNg.for.4hrs
MTB.in.Wild.type.macrophages...IFNg.for.24hrs
MTB.in.Wild.type.macrophages...IFNg.for.48hrs
MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.y
MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6.y
MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.3
MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.5
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.2
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.3
MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.5
MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.6
MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.1
MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.3
MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.4
MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.5
MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.6
MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.1
MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.2
MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.3
MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.4
MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.5
MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2.y
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.1
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.2
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.4
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.5
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.6
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.2
MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.1
MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.2
MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.3
MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.4
MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.5
MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.6
MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.5
MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.1
Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
SG2.A0_N02A01c3
SG2.B0_N02A09c3
SG2.D0_N02A01c5
SG6.G0_N5A02cy.5
SG6.H0_N5A03cy.5
SG6_A0_N7A10cy.3
SG6_B0_N7A10cy.5
SG7.AT0_N11A01cy.5
SG7.BT0_N11A02cy.5
SG7.CT0_N11A03cy.5
SG7.DT0_N11A04cy.5
SG8.A.Day.0.pre_fix_N37A04cy.5
SG8.D.Day.0.pre_N27A10cy.3
SG2.A1_N02A02c3
SG8.C.Day.2_N37A12cy.5
SG8.A.Day.3_N37A09cy.3
SG8.B.Day.3_N37A07cy.5
SG7.T7B_N11A09cy.5
SG8.B.Day.7_N37A09cy.5
SG8.A.Day.7_N37A11cy.3
SG.ISB.3.7A_N30A02cy.5
SG.ISB.3.7B_N30A03cy.3
SG.ISB.3.7D_N30A04cy.3
SG12.B0_N32A09cy.3
SG12.A1_N32A02cy.3
SG12.B1_N32A10cy.3
SG12.C1_N32A06cy.5
SG12.B2_N32A11cy.3
SG12.C2_N32A07cy.5
SG12.A4_N32A04cy.3
SG12.B4_N32A12cy.3
SG12.C4_N32A08cy.5
SG12.C6_N32A09cy.5
SG2.A8_N02A07c3
SG.ISB.3.8D_N30A06cy.3
SG6.A14_N8A10cy.5
SS_A1_RV.1
SS_A1_RV.3
hip.mutant.KL2801..biological.rep1
hip.mutant.KL2849..biological.rep2
hip.mutant.HTS1090..biological.rep2
hip.mutant.HTS1105..biological.rep1
hip.mutant.HTS1105..biological.rep2
hip.mutant.HT1120..biological.rep2
A00470_Q2_t60_diamide
A00437_Q3_t90_diamide
MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.1
MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.2
MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.1
MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.3
MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3
MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1
MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3
MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.2
MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.4
MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.2
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.4
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.5
MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.4
MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.1
MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.2
MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.4
MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.2
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.1
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2
MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.3
MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.3
MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.1
MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.3
MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.3
MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1
MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.3
MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.2
MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.3
X10ug.mL..59vsDMSO..6h
X10ug.mL..59vsDMSO..6hA
X10ug.mL..109vsDMSO..6h
X1ug.mL..241vsDMSO..6hA
X10ug.mL..241vsDMSO..6h
X1ug.mL..111895vsDMSO..6h
X2ug.mL..111895vsDMSO..6h
X2ug.mL..111895vsDMSO..6hA
X1ug.mL..121940.DMSO..12h
X10ug.mL.PA.21vsDMSO..6h
X40ug.mL.5CL.pH5.6..4h..1
X0.12mg.mL.BZAvspH5.6..5h.
X0.12mg.mL.Nam.pH5.6..2h..1
X1.2mg.mL.PZA.pH5.6..2h..
X1.2mg.mL.PZAvspH5.6..6h.
X0.1mMGSNO.20ug.mLCPZvsDMSO.6h
DIPED.50ug.mL.vs.DMSO.12h.1
X0.2ug.mL.Mtmvsctrl..0.75h..y
X0.2ug.mL.Mtm.ctrl..4h...2.y
X0.1mg.mL.TriclosanvsEtOH..6h
X0.1mg.mL.TriclosanvsEtOH..6hA
X10ug.mL.TriclosanvsDMSO..6h
X10ug.mL.TriclosanvsDMSO..6hB
X10ug.mL.TriclosanvsDMSO..6hC
X10ug.mL.EconazolevsEtOH..6h
X10ug.mL.EconazolevsEtOH..6hA
X24ug.mL.Econazole.DMSO..6h..1
X24ug.mL.Econazole.DMSO..6h..2
EMB.10ug.mL.vs.DMSO.12h.4
X10ug.mL.clofazimine.DMSO..6h
X0.32ug.mL.CervsEtOH..6hA
X0.5ug.mL.CervsEtOH..6hA
X10ug.mL.ChlorprovsEtOH..6h
X10ug.mL.ClotrimvsEtOH..6hA
X10ug.mL.clotrimvsEtOH..6h
X24ug.mL.cltrmazole.DMS..6h..1
X24ug.mL.cltrmazole.DMS..6h..2
X24ug.mL.cltrmazole.DMS..6h..3
X10uM.CCCP.DMSO..6h
X1mM.DNP.DMSO..6h..1
X1mM.DNP.DMSO..6h..2
X6ug.mL.MenadionevsDMSO..6h
X50uM.NigericinvsDMSO..6h.A
X10ug.mL.Nvb.DMSO..6h..3
X50ug.mL.RoxvsEtOH..6h
X50ug.mL.RoxvsEtOH..6hA
X5ug.mLStreptomycinvsEtOH.6h
X5ug.mLStreptomycinvsEtOH.6hA
X130ug.mL.TLMvsDMSO..6h
X130ug.mL.TLMvsDMSO..6hA
X0.13mg.mL.TLMvsDMSO..6h
X0.5uMValinomycin.70mMKClvsDMSO.6h
X20ug.ml.KCN.vs.DMSO.6hrs.y
Tet_5ug_30M_01
X10ug.ml.Ethambutol.vs.DMSO.12hrs.3
CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.1
CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.2
CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.2
H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.2
H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.1
H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.2
H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.2
H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.1

Enriched in 0 Functional Categories

Nameq-value

Enriched in 5 Condition Blocks

Nameq-value
lipids - carbon source7.96E-5
limited - carbon source0.000526325
DNA damage1.48E-9
hypoxia2.82E-10
oxidative stress2.89E-9

Enriched in 2 GREs

GREMotifMotif e-valueq-value
61N/A-1.12E-5
169.2E-160.000499669