( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_pssms/552f63f7b744335b89d692db): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 74 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0001 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.9173 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.9222 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 1.4027 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 1.4028 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 1.4028 | 7718840 | load_template( ) | .../template.php:720 |
8 | 1.4029 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 1.4044 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 1.4048 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 1.4048 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 1.4067 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 1.4068 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 2.3808 | 7749520 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 2.3808 | 7749520 | bicluster_motifs_shortcode( ) | .../shortcodes.php:433 |
16 | 2.3809 | 7749648 | file_get_contents ( ) | .../short_codes.php:74 |
ID: 552f63f7b744335b89d692db
# Conditions: 125
# Genes: 21
Residual: 0.48373661619109
# Conditions: 125
# Genes: 21
Residual: 0.48373661619109
Bicluster Motifs
Bicluster Genes
- Rv0017c
- Rv0070c
- Rv1071c
- Rv1505c
- Rv1520
- Rv1556
- Rv2274c
- Rv2562
- Rv2701c
- Rv2716
- Rv2784c
- Rv2937
- Rv2993c
- Rv2998
- Rv3232c
- Rv3373
- Rv3393
- Rv3740c
- Rv3783
- Rv3901c
- Rv3918c
Bicluster Conditions
- MTB.strain.1254.Ctrl.vs.high.aeration.rep1
- MTB.strain.1254.Ctrl.vs.high.aeration.rep2
- MTB.strain.1254.Ctrl.vs.high.aeration.rep3
- MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.1
- MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2
- MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.3
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.3
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.4
- H37Rv.0.2..Oxygen..2h..2
- H37Rv.0.2..Oxygen..2h..5
- H37Rv.0.2..Oxygen..2h..6
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.6
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
- Starvation_1254_12h_01
- Starvation_1254_12h_02
- Starvation_1254_12h_04
- Starvation_1254_24h_01
- Starvation_1254_24h_02
- Starvation_1254_24h_03
- Starvation_1254_24h_04
- Starvation_1254_24h_05
- Starvation_1254_24h_06
- Starvation_1254_24h_07
- Starvation_1254_3d_01
- Starvation_1254_3d_02
- Starvation_1254_3d_03
- Starvation_1254_3d_04
- Starvation_1254_5d_01
- Starvation_1254_5d_02
- Starvation_1254_5d_03
- Starvation_1254_5d_04
- Starvation_1254_6h_01
- Starvation_1254_6h_03
- Starvation_1254_6h_04
- Starvation_1254_6h_05
- Starvation_1254_6h_06
- Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
- H37Rv.reaeration.for.1hrs.rep.2
- H37Rv.reaeration.for.1hrs.rep.5
- H37Rv.reaeration.for.1hrs.rep.6
- H37Rv.reaeration.for.1hrs.rep.8
- H37Rv.reaeration.for.6hrs.rep.1
- H37Rv.reaeration.for.6hrs.rep.2
- H37Rv.reaeration.for.12hrs.rep.1
- H37Rv.reaeration.for.12hrs.rep.3
- H37Rv.reaeration.for.12hrs.rep.4
- H37Rv.reaeration.for.12hrs.rep.5
- H37Rv.reaeration.for.24hrs.rep.3
- H37Rv.reaeration.for.24hrs.rep.5
- H37Rv.reaeration.for.24hrs.rep.6
- BCG.2hr.phagosomal.profile
- M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
- MTB.in.Wild.type.macrophages.for.24hrs
- MTB.in.Wild.type.macrophages...IFNg.for.4hrs
- MTB.in.Wild.type.macrophages...IFNg.for.24hrs
- MTB.in.Wild.type.macrophages...IFNg.for.48hrs
- Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
- Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
- Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
- Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
- Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
- Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
- Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
- Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
- Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
- Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
- Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
- WT_140mM_NaCl_Rep2
- WT_140mM_NaCl_Rep4
- MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.3
- X0.1mMGSNO.10ug.mLmdvsDMSO.6h
- X25ug.mLCPZ.0.1mMGSNO.DMSO..1
- X25ug.mLCPZ.0.1mMGSNO.DMSO..2
- X5ug.mL.CFZ.0.1mM.GSNO.DMSO..2
- X0.1mMGSNO.5ug.mLKCNvsDMSO.6h.A
- X10ug.mLchlorpromazinevsctrl.6h
- X20ug.mL.chlorprmz.DMSO..6h..1
- X20ug.mL.CPZvsDMSO..6h.A
- X25ug.mL.CPZvsDMSO..6h.A
- X60ug.mL.ChlorprovsEtOH..6h
- X10ug.mL.clotrimvsEtOH..6h
- X24ug.mL.cltrmazole.DMS..6h..1
- X10uM.CCCP.DMSO..6h
- X0.5mM.DNP.DMSO..6h
- X1mM.DNP.DMSO..6h..2
- X100uM.DCCD.DMSO..6h
- X2mM.DTTvsDMSO..6h
- X5ug.mL.KCN.DMSO..6h..1
- X10ug.mL.menadionevsDMSO..6h
- X10ug.mLmnd.Dubos.vsDMSO.6h
- X50uM.NigericinvsDMSO..6h.A
- X10ug.mL.TRZ.DMSO..6h..1
- X25ug.mL.TRZ.DMSO..6h
- X1uM.ValinomycinvsDMSO..6h.A
- X0.5uMValinomycin.70mMKClvsDMSO.6h
- X20ug.ml.KCN.vs.DMSO.6hrs.y
- CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.1
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1
- CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1
- CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.2