Bicluster

ID: 552f6878b744335b89d6adcc
# Conditions: 193
# Genes: 26
Residual: 0.49319711237431

Bicluster Motifs

Bicluster Genes

  • Rv0269c
  • Rv0347
  • Rv0414c
  • Rv0437c
  • Rv0591
  • Rv0630c
  • Rv0775
  • Rv1199c
  • Rv1231c
  • Rv1399c
  • Rv1429
  • Rv1568
  • Rv1579c
  • Rv1834
  • Rv2059
  • Rv2170
  • Rv2177c
  • Rv2601
  • Rv2652c
  • Rv2769c
  • Rv2899c
  • Rv3349c
  • Rv3517
  • Rv3707c
  • Rv3745c
  • Rv3817

Bicluster Conditions

  • High.iron.wt.vs.low.iron.wt.1a
  • High.iron.wt.vs.low.iron.wt.2a
  • High.iron.wt.vs.low.iron.wt.3a
  • pH4.8vspH6.8..2h.
  • pH4.8vspH6.8..2h.B
  • pH4.8vspH6.8..4h.
  • pH4.8vspH6.8..4h.C
  • pH5.2vspH6.8..5h.
  • pH5.2vspH6.8..5.5h.
  • pH5.2vspH6.8..10.5h.
  • pH5.2vspH6.8..11h.
  • pH5.6vspH6.8..2h.
  • pH5.6vspH6.8..2h.A
  • pH5.6vspH6.8..4h.
  • pH5.6vspH6.8..4h.B
  • pH5.6vspH6.8..5h.
  • PBS.Tween.7H9
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
  • Glucose_5mM_10min_01
  • Glycerol_1.
  • Glycerol_1._10M_01
  • Starvation_1254_OA50_12h_02
  • Starvation_1254_OA50_24h_01
  • Starvation_1254_OA50_24h_02
  • Starvation_1254_OA50_24h_03
  • Starvation_1254_OA50_3d_01
  • Starvation_1254_OA50_3d_02
  • Starvation_1254_OA50_3d_03
  • Starvation_1254_OA50_3d_04
  • Starvation_1254_OA50_5d_01
  • Starvation_1254_OA50_5d_03
  • Starvation_1254_OA50_5d_04
  • Starvation_1254_OA50_6h_02
  • Starvation_1254_OA50_6h_03
  • Starvation_1254_PA50_24h_01
  • Starvation_1254_PA50_24h_02
  • Starvation_1254_PA50_24h_04
  • Starvation_1254_PA50_6h_01
  • Starvation_1254_PA50_6h_02
  • Starvation_OA50_24h_01
  • Starvation_OA50_24h_03
  • Starvation_OA50_24h_04
  • Starvation_OA50_6h_04
  • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.1
  • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.2
  • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1
  • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.2
  • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3
  • Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
  • CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
  • MTB.in.Wild.type.macrophages.for.4hrs
  • MTB.in.Wild.type.macrophages.for.24hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.4hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.24hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.48hrs
  • Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
  • Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
  • Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
  • Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
  • Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
  • Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
  • Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
  • Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
  • WT_140mM_NaCl_Rep3
  • WT_140mM_NaCl_Rep4
  • X1ug.mL..59vsDMSO..6h
  • X1ug.mL..59vsDMSO..6hA
  • X.109..0.1ug.mL..vs.DMSO..12h..GEO.acc.GSM28050.
  • X.109..10ug.mL..vs.DMSO..12h..replicate.1..GEO.acc..GSM28053.
  • X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054.
  • X.241..1ug.mL..DMSO..12h..1
  • X.241..10ug.mL..DMSO..12h..1
  • X.241..10ug.mL..DMSO..12h..2
  • X20ug.mL.Procept.6776vsDMSO..6h
  • X30ug.mLProcept6776vsDMSO.6h
  • X5ug.mLProcept.6778vsDMSO.6h
  • X5ug.mLProcept.6778vsDMSO.6hA
  • X20ug.mLProcept6778vsDMSO.6h
  • X10ug.mL.PA.1vsDMSO..6h
  • X50ug.mL.PA.21vsDMSO..6h
  • X0.2ug.mL.PA824.DMSO..6h..1
  • X0.2ug.mL.PA824.DMSO..6h..2
  • X0.4ug.mL.PA824.DMSO..6h..1
  • X0.4ug.mL.PA824.DMSO..6h..2
  • X0.4ug.mL.PA824.DMSO..6h..3
  • X2ug.mL.PA824.DMSO..6h..1
  • X2ug.mL.PA824.DMSO..6h..2
  • DIPED.10ug.mL.vs.DMSO.12h.1
  • DIPED..50ug.mL..DMSO..12h
  • DIPED..100ug.mL..DMSO..12h..2
  • DIPED..100ug.mL..DMSO..12h..3
  • X0.1mg.mL.TriclosanvsEtOH..6h
  • X0.1mg.mL.TriclosanvsEtOH..6hA
  • X0.1mg.mLTriclosanvsEtOH.6hC
  • X0.15mg.mL.TricvsEtOH..6h
  • X0.15mg.mL.TricvsEtOH..6hA
  • X10ug.mL.TriclosanvsDMSO..6h
  • X10ug.mL.TriclosanvsDMSO..6hA
  • X50ug.mL.Triclosan.DMSO..6h
  • X50ug.mL.TriclosanvsEtOH..6hA
  • X100ug.mL.TriclosanvsEtOH..6h
  • X100ug.mL.TriclosanvsEtOH..6hA
  • X10ug.mL.EMBvsDMSO..6h
  • EMB..10ug.mL..DMSO..12h
  • EMB.10ug.mL.vs.DMSO.12h.2
  • EMB.10ug.mL.vs.DMSO.12h.3
  • EMB.10ug.mL.vs.DMSO.12h.4
  • X20ug.mL.ethambutol.DMSO
  • X0.2mg.mL.AmpvsEtOH..6h
  • X12.5ug.mL.AntimycinvsDMSO..6h
  • X50ug.mLAntimycinAvsDMSO..6h
  • X50ug.mLAntimycinAvsDMSO..6hB
  • X0.5ug.mL.CeruleninvsDMSO..6hA
  • X20ug.mL.Cephalexin.Ctrl..6h..1
  • X20ug.mL.Cephalexin.Ctrl..6h..2
  • X100ug.mL.Cephalexin.Ctrl..6h
  • X10ug.mL.methoxatinvsDMSO..6h.A
  • X130ug.mL.TLMvsDMSO..6hA
  • X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1
  • X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.1
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.x
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4
  • X2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
  • X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.1
  • X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.2
  • X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.3.x
  • X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.x
  • X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
  • X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1
  • X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
  • X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.1
  • X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.2
  • X130ug.ml.TLM.vs.DMSO.6hrs.rep.1
  • X130ug.ml.TLM.vs.DMSO.6hrs.rep.2
  • X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.1
  • X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.2
  • X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.2
  • X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2
  • MTB1254.3524.1._INH_20MIN
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.y
  • X0.2mg.ml.Ampicillin.vs.Ethanol.6hrs
  • X10ug.ml.Ethambutol.vs.DMSO.12hrs.3
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.1
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.3
  • H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
  • H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
  • H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
  • H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.1
  • H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.1
  • H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.1
  • H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.2
  • H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.2
  • MTB.at.T0..biological.rep2
  • MTB.at.T30..biological.rep1
  • MTB.at.T30..biological.rep2
  • MTB.at.T30..biological.rep3
  • MTB.at.T60..biological.rep2
  • MTB.at.T180..biological.rep1
  • MTB.at.T180..biological.rep2
  • MTB.at.T180..biological.rep3
  • MTB.at.T180..biological.rep4
  • MTB.at.T360..biological.rep1
  • MTB.at.T360..biological.rep2
  • MTB.at.T360..biological.rep3
  • MTB.at.T360..biological.rep4